Publications

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In preparation/submitted preprints

A. Mahajan, F. Ratti, B. Wang, H. El-Samad, J. H. Kaufman and V. Gopalakrishnan (2025). Macroscopic analyses of RNA-Seq data to reveal chromatin modifications in aging and disease.

A. Mahajan, E. Navarro, W. Poole and C. F. Lopez (2025). Multiscale Modeling Primer: Focus on Chromatin and Epigenetics .

Peer-reviewed articles (contact me if you can't access a specific paper)

C. Li, B. Chakrabarti, P. Castilla, A. Mahajan and D. Saintillan (2023). Chemomechanical model of sperm locomotion reveals two modes of swimming. Editor suggestion, Phys Rev Fluids. (In News: UC San Diego Today )

A. Mahajan, W. Yan, A. Zidovska, D. Saintillan and M. J. Shelley (2022). Euchromatin activity enhances segregation and compaction of heterochromatin in the cell nucleus. Phys Rev X. (In News: phys.org, sciencedaily.com)

A. Mahajan and D. Saintillan (2022). Self-induced hydrodynamic coil-stretch transition of active polymers. Phys Rev E..

M. Alam, A. Mahajan and D. Shivanna (2015). On Knudsen-minimum effect and temperature bimodality in a dilute granular Poiseuille flow. Journal of Fluid Mechanics.

Thesis/Dissertations

PhD: From nano to micro: activity-driven self-organization of interphase chromatin, University of California San Diego, 2021. [reprint]

Masters: Two problems on driven granular matter: Poiseuille and Taylor-Couette flows, Jawaharlal Nehru Center for Advanced Scientific Research, 2016. [reprint]