Achal Mahajan

Achal Mahajan

Scientist II - Computational Biology, Modeling and Simulation

Publications

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In preparation/submitted preprints

  • A. Mahajan, F. Ratti, B. Wang, H. El-Samad, J. H. Kaufman and V. Gopalakrishnan (2023). Macroscopic analyses of RNA-Seq data to reveal chromatin modifications in aging and disease.

  • F. Ratti, B. A. Yang, C. Lagger, A. Mahajan, B. Wang, J. H. Kaufman, V. Gopalakrishnan and H. El-Samad (2023). Semantic Information and Channel Capacity: A unified perspective for the molecular channel.

  • A. Mahajan, L. Scotzniovsky, M. J. Shelley and D. Saintillan (2023). Hydrodynamics induced loop extrusion of DNA.

    Peer-reviewed articles (contact me if you can't access a specific paper)

  • C. Li, B. Chakrabarti, P. Castilla, A. Mahajan and D. Saintillan (2023). A chemomechanical model of sperm locomotion reveals two modes of swimming. Phys Rev Fluids, doi.org/10.1101/2022.04.10.487801.

  • A. Mahajan, W. Yan, A. Zidovska, D. Saintillan and M. J. Shelley (2022). Euchromatin activity enhances segregation and compaction of heterochromatin in the cell nucleus. Phys Rev X., doi.org/10.1103/PhysRevX.12.041033. (In News: phys.org, sciencedaily.com)

  • A. Mahajan and D. Saintillan (2022). Self-induced hydrodynamic coil-stretch transition of active polymers. Phys Rev E., doi.org/10.1103/PhysRevE.105.014608.

  • M. Alam, A. Mahajan and D. Shivanna (2015). On Knudsen-minimum effect and temperature bimodality in a dilute granular Poiseuille flow. Journal of Fluid Mechanics, doi.org/10.1017/jfm.2015.523.

    Thesis/Dissertations

  • PhD: From nano to micro: activity-driven self-organization of interphase chromatin, University of California San Diego, 2021. [reprint]

  • Masters: Two problems on driven granular matter: Poiseuille and Taylor-Couette flows, Jawaharlal Nehru Center for Advanced Scientific Research, 2016. [reprint]